BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D09SP1|AL427009
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1750 0.0
>3x_Contig1766
Length = 23951
Score = 1750 bits (880), Expect = 0.0
Identities = 905/912 (99%), Gaps = 3/912 (0%)
Strand = Plus / Plus
Query: 1 gatccaatctcagtcatgaaatctaacgcttcagctgccgctgcagaccaaattaagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 gatccaatctcagtcatgaaatctaacgcttcagctgccgctgcagaccaaattaagacc 1162
Query: 61 catgaatacgaacatttaacttctgtgcctatagtgcagcctctaccaattactgatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 catgaatacgaacatttaacttctgtgcctatagtgcagcctctaccaattactgatagg 1222
Query: 121 ttgagcagcgaa-cagctcaaaaatataaacctaatttgccaggtgggttcgaagagtac 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 ttgagcagcgaagcagctcaaaaatataaacctaatttgccaggtgggttcgaagagtac 1282
Query: 180 aagtctttgcacaaggaatcacttgaaaatccagccaagttttaccatgaacgtgctcag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 aagtctttgcacaaggaatcacttgaaaatccagccaagttttaccatgaacgtgctcag 1342
Query: 240 ctgttgaattggttcaaaccatacgatcaagttttcatcccagataccgaag-taaacca 298
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1343 ctgttgaattggttcaaaccatacgatcaagttttcatcccagataccgaaggtaaacca 1402
Query: 299 acttttgagaacaacgcttggtttaccaacggtcaattgaacgcttgttacaatttggta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 acttttgagaacaacgcttggtttaccaacggtcaattgaacgcttgttacaatttggta 1462
Query: 359 gacagacatgccttcactcaaccaaacaaggttgccattctttatgaagctgatgaacca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 gacagacatgccttcactcaaccaaacaaggttgccattctttatgaagctgatgaacca 1522
Query: 419 ggtcaaggttatagtctcacttatgcggaattgttagaacaagtctgtwaagttgctcaa 478
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1523 ggtcaaggttatagtctcacttatgcggaattgttagaacaagtctgtaaagttgctcaa 1582
Query: 479 atcttgcaatactcgatgaacgtcaagaaaggtgacacggtcgcagtttatatgccaatg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 atcttgcaatactcgatgaacgtcaagaaaggtgacacggtcgcagtttatatgccaatg 1642
Query: 539 atcccacaggctttgattaccttgttggcaattactcgtatcggtgccattcattccgtt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 atcccacaggctttgattaccttgttggcaattactcgtatcggtgccattcattccgtt 1702
Query: 599 gtttttgctgggttctcttcgaattcattgcgtgatcgtattaacgatgcttactcaaag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1703 gtttttgctgggttctcttcgaattcattgcgtgatcgtattaacgatgcttactcaaag 1762
Query: 659 acagtcatcaccaccgatgaatctaagagaggtggtaagaccatcgaaaccaagcgtatc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1763 acagtcatcaccaccgatgaatctaagagaggtggtaagaccatcgaaaccaagcgtatc 1822
Query: 719 gtcgatgaagccttgaaggatacccctcaagtaacaaacgttttgggtcttcaaacgtac 778
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1823 gtcgatgaagccttgaaggatacccctcaagtaacaaacgtttt-ggtcttcaaacgtac 1881
Query: 779 tcataacgaaaatatcaagtacattccaggtagggrtttggactgggrtgaggaagtcaa 838
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1882 tcataacgaaaatatcaagtacattccaggtagggatttggactgggatgaggaagtcaa 1941
Query: 839 gaagtacaaatcttacaccccatgcgaacctgttgactctgaacatcctttgttcttatt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 gaagtacaaatcttacaccccatgcgaacctgttgactctgaacatcctttgttcttatt 2001
Query: 899 gtatacttyggg 910
|||||||| |||
Sbjct: 2002 gtatacttcggg 2013
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5776
Number of Sequences: 1807
Number of extensions: 5776
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)